Please Evaluate My Training Regimen? (long)

I am happy with my fitness progress so far, but I am always looking for ways to improve. To get the facts out of the way, I am currently a 292 lb., 32 year old male with 40% body fat. I would love input on my training regimen.

My food diary is public if you want to view it, but that is not really the focus of my question. I computed my calorie needs based upon the goal of being a moderately active person weighing in at 225 lb. I eat 1/8 of my weekly calories (~2900) six days a week and 2/8 (~5800) my weekly calories on Sundays as a free/Spike/cheat day. I was eating low carb, but I have found that I need substantially more carbs as I increase my exercise load. I do not always get to my full calorie allotment, but I never end a day hungry and I eat enough to make sure I feel like my body is healing appropriately after workouts. I sneak a few bites here and there from leftovers, so I feel that I am fairly spot-on, maybe slightly under, on my calories; I always record if a few bites becomes a real serving, or if I do it more than once a day. I do not directly eat back my exercise calories, since they are built into my activity level of being "moderately active".

I run C25K three days per week (MWF), and I do Stronglifts 5x5 three days per week (TuThSat). Sundays are my rest day. In addition to this, I usually will have one long, slow burn activity one day per week, such as going for a stroll in the woods for a couple hours. My runs are slow, and my weights are light, but both are improving. A bit of tendinitis in my shoulder and heel means that some days I need to stop early - I never do more than my body will allow.

Currently, I find that I need an extra rest day every-other week. To keep up with C25K progress, I drop one day of lifting. Within two weeks, I will be running a full 5k, and I plan to then drop running days instead of lifting days if I need an extra day of rest. I want to improve my running speed and distance, but I also know that I need to focus on strength to both lose fat and gain muscle.

Once C25K is finished, I plan to switch to:

M - HIIT running, as close as I am able; I expect to be bad at this at first
Tu - Stronglifts 5x5
W - run 5k for endurance (drop if I need another rest day)
Th - Stronglifts 5x5
F - run 5k for endurance
Sat - Stronglifts 5x5
Sun - rest

My goal is to be as generally fit as possible. Do you feel this is a decent plan? Should I switch something up? Is there something I am missing? Your feedback is both welcome and encouraged.

Thank you!